Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904965.1_cds_XP_016455074.1_49036
CDS Infomation

[gene=LOC107779213] [db_xref=GeneID:107779213] [protein=uncharacterized protein LOC107779213 isoform X3] [protein_id=XP_016455074.1] [location=complement(join(7690..7890,8380..8579,8709..8896,9657..9760,11678..11877,12005..12114,12252..12462,12599..12796,13489..13615))] [gbkey=CDS]
Sequence

ATGTATAAGGAGAAAGAAGGATTGTTGCCCTGGATCCACAAATTCGCGCCTAGAAAGAAG
GTTGGGATGCTGCTGTTGTGTGCTGTTTCATTAGCAGTTCTTGTCTGGGTCTTGTTTGTT
GACAAAGCTGGACAAAAGGATAATTCTACGTATATTGAGTCAATAGAACAAACTAATGTT
GGACAAAGTGCATCAATTGTCCAACCTCTTCCTCCTCCGCCTCCTACTGTATACTTCAAA
GGATACACTCTTCCTCCTGGGAATCCATGTGAAGGCTTCACGTTGCCACCGCCGCCAGCA
GATAAAAAGAGGACGGGACCAAGGCCATGTCCAGTATGCTACCTTCCTGTTGAACAAGCT
ATTGCATTAATGCCGGGTGCACCATCCTTTTCTCCTGGGATTAGCAATTTGACTTACATT
CGTGAAGAAAATTTAAGAAAAACCGAGTTTGGAGGTTCAGAATTTGGAGGATATCCTTCA
CTGATGCAAAGGAATGATTCATATGATTTAAGAGAGTCCATGAGTGTGCACTGTGGATTT
ATTAGAGGCATCAGGCCCGGACATCAGACAGGTTTTGACATTGATGATTCTGACCTTCTT
GAAATGGAATCTTGTCGAGGTGTTGTTGTGGCATCAGCAATATTTGGCGCTTTTGATTTG
ATAAGGCAACCAAAAAATATCAGCGAATATGCAAAGAAAAATGCATGCTTTTGTATGTTC
GTGGATGAAGAAACAGAAGTTTTCTTAAGAAATTCTAGTGAGCTAGATGGTACCATGAGA
ATTGGTTTATGGAGAATTGTCAGTGTTCATAACCTACCTTATGATGATCCGAGGCGAAAT
GGGAAGGTTCCAAAGCTTCTGCTTCACAGGCTTTTTCCTAATGCCCGTTATTCTCTATGG
ATAGATGCAAAACTTGAGCTGGTTGTCGATCCATATCAAATACTTGAAAGGTTCTTGTGG
AGAAAAAATGCGAGCTTTGCGATATCAAGGCATTATAGGCGCTTTGATGTGTATGTAGAA
GCAGAAGCTAATAAGGCTGCTGCAAAGTTTGACAATGCTTCCATCGATTTCCAAGTTGAA
TTCTATAAAAAGGAAGGTCTAACTCCTTATTCCACAGCTAAACTTCCTATTACAAGTGAT
GTCCCGGAGGGATGTGTAATAGTAAGAGAGCACAATCCAATCTCCAATCTATTTGCTTGT
CTTTGGTTTAATGAAGTGGACCGTTTTACTCCAAGAGACCAAATAAGCTTCGCCATTGTG
AGGGACAAGATCATGTCAAAGACAAATTGGACTGTTAATATGTTCCTGGACTGTGAAAGG
CGCAACTTTGTGGTTCAGGGGTATCATAGAGACATTCTTGAGCACTGGGCTCCCCCGCCT
CCACCTGGCGGTACTGAAATTGTTCATCCTCCTCCGCCTGTAGTCGATGAAACCCTACAG
ACCTCACGCAATGTTACATCATCAAGTTATGTTACTGATCCCAGAAAGCGTGAGAGGAAT
AGGAAATCCAAGCGTCATAGAAAAGTTATAGGAAGTTAG

Peptide Sequence

PEP ID

XP_016455074.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107779213 isoform X3 [Nicotiana tabacum]
Sequence

MYKEKEGLLPWIHKFAPRKKVGMLLLCAVSLAVLVWVLFVDKAGQKDNSTYIESIEQTNV
GQSASIVQPLPPPPPTVYFKGYTLPPGNPCEGFTLPPPPADKKRTGPRPCPVCYLPVEQA
IALMPGAPSFSPGISNLTYIREENLRKTEFGGSEFGGYPSLMQRNDSYDLRESMSVHCGF
IRGIRPGHQTGFDIDDSDLLEMESCRGVVVASAIFGAFDLIRQPKNISEYAKKNACFCMF
VDEETEVFLRNSSELDGTMRIGLWRIVSVHNLPYDDPRRNGKVPKLLLHRLFPNARYSLW
IDAKLELVVDPYQILERFLWRKNASFAISRHYRRFDVYVEAEANKAAAKFDNASIDFQVE
FYKKEGLTPYSTAKLPITSDVPEGCVIVREHNPISNLFACLWFNEVDRFTPRDQISFAIV
RDKIMSKTNWTVNMFLDCERRNFVVQGYHRDILEHWAPPPPPGGTEIVHPPPPVVDETLQ
TSRNVTSSSYVTDPRKRERNRKSKRHRKVIGS

Transcript Sequence

Gene sequence data has not been registered.